Trans-eQTLs across different cancer types
In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.
|
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
Gene symbol
|
Gene position (hg19)
|
p-valule
|
|||
|---|---|---|---|---|---|---|---|---|---|
| THCA | rs6993610 | chr8:10330994 | C/G | SGK223 | chr8:8175258-8244008:- | 0.39 | 7.1 | 4.56E-12 | Box Plot |
| THCA | rs6994096 | chr8:3230469 | G/C | CSMD1 | chr8:2792875-4852494:- | -0.44 | -7.47 | 3.79E-13 | Box Plot |
| THCA | rs6994541 | chr8:9282659 | C/G | SGK223 | chr8:8175258-8244008:- | 0.36 | 6.17 | 1.46E-9 | Box Plot |
| THCA | rs6995037 | chr8:11780887 | A/G | SGK223 | chr8:8175258-8244008:- | 0.37 | 6.68 | 6.8E-11 | Box Plot |
| THCA | rs6995404 | chr8:11182148 | C/G | SGK223 | chr8:8175258-8244008:- | -0.35 | -6.75 | 4.2E-11 | Box Plot |
| THCA | rs6995787 | chr8:11694604 | C/G | SGK223 | chr8:8175258-8244008:- | -0.36 | -6.07 | 2.58E-9 | Box Plot |
| THCA | rs6995827 | chr8:11784234 | C/T | SGK223 | chr8:8175258-8244008:- | 0.36 | 6.68 | 6.48E-11 | Box Plot |
| THCA | rs6995832 | chr8:11784240 | C/T | SGK223 | chr8:8175258-8244008:- | 0.36 | 6.68 | 6.48E-11 | Box Plot |
| THCA | rs6996342 | chr8:11784541 | C/T | SGK223 | chr8:8175258-8244008:- | 0.36 | 6.55 | 1.45E-10 | Box Plot |
| THCA | rs6996368 | chr8:11182704 | G/A | SGK223 | chr8:8175258-8244008:- | -0.35 | -6.68 | 6.47E-11 | Box Plot |
| THCA | rs6996823 | chr8:3274215 | T/G | CSMD1 | chr8:2792875-4852494:- | -0.51 | -5.96 | 4.9E-9 | Box Plot |
| THCA | rs6996846 | chr8:10976494 | C/G | SGK223 | chr8:8175258-8244008:- | 0.54 | 10.36 | 7.85E-23 | Box Plot |
| THCA | rs6998387 | chr8:11293458 | C/T | SGK223 | chr8:8175258-8244008:- | -0.37 | -7.18 | 2.69E-12 | Box Plot |
| THCA | rs6998690 | chr8:11798796 | A/T | SGK223 | chr8:8175258-8244008:- | -0.39 | -7.14 | 3.58E-12 | Box Plot |
| THCA | rs6999030 | chr8:11795308 | G/A | SGK223 | chr8:8175258-8244008:- | -0.45 | -8.35 | 7.56E-16 | Box Plot |